Software
Software and interchange formats for computational models in bioengineering:

OpenCMISS-Iron
A distributed parallel mathematical modelling environment for complex bioengineering problems.

CMISS-cm
Original application for Continuum Mechanics, Image analysis, Signal processing and System identification.

CellML
The XML language and API for storing and exchanging mathematical models of biological systems.

OpenCOR
A cross-platform modelling environment used to organise, edit, simulate and analyse CellML files.